@article{sevincc2022brd9,

title = {BRD9-containing non-canonical BAF complex maintains somatic cell transcriptome and acts as a barrier to human reprogramming},

author = {Kenan Sevinç and Gülben Gürhan Sevinç and Ayşe Derya Cavga and Martin Philpott and Simge Kelekçi and Hazal Can and Adam P Cribbs and Abdullah Burak Yıldız and Alperen Yılmaz and Enes Sefa Ayar and others},

url = {https://doi.org/10.1016/j.stemcr.2022.10.005},

year  = {2022},

date = {2022-01-01},

urldate = {2022-01-01},

journal = {Stem Cell Reports},

volume = {17},

number = {12},

pages = {2629–2642},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{arabaci2021going,

title = {Going up the hill: chromatin-based barriers to epigenetic reprogramming},

author = {Dilşad H Arabacı and Gizem Terzioğlu and Büşra Bayırbaşı and Tamer T Önder},

url = {https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.15628},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {The FEBS Journal},

volume = {288},

number = {16},

pages = {4798–4811},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{ebrahimi2019bromodomain,

title = {Bromodomain inhibition of the coactivators CBP/EP300 facilitate cellular reprogramming},

author = {Ayyub Ebrahimi and Kenan Sevinç and Gülben Gürhan Sevinç and Adam P Cribbs and Martin Philpott and Fırat Uyulur and Tunç Morova and James E Dunford and Sencer Göklemez and Şule Arı and others},

url = {https://www.nature.com/articles/s41589-019-0264-z},

year  = {2019},

date = {2019-01-01},

urldate = {2019-01-01},

journal = {Nature chemical biology},

volume = {15},

number = {5},

pages = {519–528},

publisher = {Nature Publishing Group US New York},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{onder2012chromatin,

title = {Chromatin-modifying enzymes as modulators of reprogramming},

author = {Tamer T Onder and Nergis Kara and Anne Cherry and Amit U Sinha and Nan Zhu and Kathrin M Bernt and Patrick Cahan and B Ogan Mancarci and Juli Unternaehrer and Piyush B Gupta and others},

url = {https://www.nature.com/articles/nature10953},

year  = {2012},

date = {2012-01-01},

urldate = {2012-01-01},

journal = {Nature},

volume = {483},

number = {7391},

pages = {598–602},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{yedier2022epikol,

title = {EPIKOL, a chromatin-focused CRISPR/Cas9-based screening platform, to identify cancer-specific epigenetic vulnerabilities},

author = {Ozlem Yedier-Bayram and Bengul Gokbayrak and Alisan Kayabolen and Ali Cenk Aksu and Ayse Derya Cavga and Ahmet Cingöz and Ezgi Yagmur Kala and Goktug Karabiyik and Rauf Günsay and Beril Esin and others},

url = {https://www.nature.com/articles/s41419-022-05146-4},

year  = {2022},

date = {2022-01-01},

urldate = {2022-01-01},

journal = {Cell Death & Disease},

volume = {13},

number = {8},

pages = {710},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{zhang2022genome,

title = {Genome-wide CRISPR screen identifies PRC2 and KMT2D-COMPASS as regulators of distinct EMT trajectories that contribute differentially to metastasis},

author = {Yun Zhang and Joana Liu Donaher and Sunny Das and Xin Li and Ferenc Reinhardt and Jordan A Krall and Arthur W Lambert and Prathapan Thiru and Heather R Keys and Mehreen Khan and others},

url = {https://www.nature.com/articles/s41556-022-00877-0},

year  = {2022},

date = {2022-01-01},

urldate = {2022-01-01},

journal = {Nature cell biology},

volume = {24},

number = {4},

pages = {554–564},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{kelekcci2022perspectives,

title = {Perspectives on current models of Friedreich’s ataxia},

author = {Simge Kelekçi and Abdullah Burak Yıldız and Kenan Sevinç and Deniz Uğurlu Çimen and Tamer Önder},

url = {https://www.frontiersin.org/articles/10.3389/fcell.2022.958398/full?&utm_source=Email_to_authors_&utm_medium=Email&utm_content=T1_11.5e1_author&utm_campaign=Email_publication&field=&journalName=Frontiers_in_Cell_and_Developmental_Biology&id=958398},

year  = {2022},

date = {2022-01-01},

urldate = {2022-01-01},

journal = {Frontiers in Cell and Developmental Biology},

pages = {1588},

publisher = {Frontiers},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{sevincc2022brd9,

title = {BRD9-containing non-canonical BAF complex maintains somatic cell transcriptome and acts as a barrier to human reprogramming},

author = {Kenan Sevinç and Gülben Gürhan Sevinç and Ayşe Derya Cavga and Martin Philpott and Simge Kelekçi and Hazal Can and Adam P Cribbs and Abdullah Burak Yıldız and Alperen Yılmaz and Enes Sefa Ayar and others},

url = {https://doi.org/10.1016/j.stemcr.2022.10.005},

year  = {2022},

date = {2022-01-01},

urldate = {2022-01-01},

journal = {Stem Cell Reports},

volume = {17},

number = {12},

pages = {2629–2642},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{arabaci2021going,

title = {Going up the hill: chromatin-based barriers to epigenetic reprogramming},

author = {Dilşad H Arabacı and Gizem Terzioğlu and Büşra Bayırbaşı and Tamer T Önder},

url = {https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.15628},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {The FEBS Journal},

volume = {288},

number = {16},

pages = {4798–4811},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{uugurlu2021af10,

title = {AF10 (MLLT10) prevents somatic cell reprogramming through regulation of DOT1L-mediated H3K79 methylation},

author = {Deniz Uğurlu-Çimen and Deniz Odluyurt and Kenan Sevinç and Nazlı Ezgi Özkan-Küçük and Burcu Özçimen and Deniz Demirtaş and Eray Enüstün and Can Aztekin and Martin Philpott and Udo Oppermann and others},

url = {https://epigeneticsandchromatin.biomedcentral.com/articles/10.1186/s13072-021-00406-7},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {Epigenetics & Chromatin},

volume = {14},

number = {1},

pages = {1–13},

publisher = {BioMed Central},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{tu2021vivo,

title = {In vivo library screening identifies the metabolic enzyme aldolase A as a promoter of metastatic lung colonization},

author = {Zhenbo Tu and Shengqi Hou and Yurong Zheng and Maerjianghan Abuduli and Tamer Onder and Andrew M Intlekofer and Antoine E Karnoub},

url = {https://www.sciencedirect.com/science/article/pii/S258900422100393X},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {Iscience},

volume = {24},

number = {5},

pages = {102425},

publisher = {Elsevier},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{marsee2021building,

title = {Building consensus on definition and nomenclature of hepatic, pancreatic, and biliary organoids},

author = {Ary Marsee and Floris JM Roos and Monique MA Verstegen and Floris Roos and Monique Verstegen and Hans Clevers and Ludovic Vallier and Takanori Takebe and Meritxell Huch and Weng Chuan Peng and others},

url = {https://www.sciencedirect.com/science/article/pii/S1934590921001624},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {Cell Stem Cell},

volume = {28},

number = {5},

pages = {816–832},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{guney2021development,

title = {Development, characterization, and hematopoietic differentiation of Griscelli syndrome type 2 induced pluripotent stem cells},

author = {Gülen Güney-Esken and Özgür Doğuş Erol and Burcu Pervin and Gülben Gürhan Sevinç and Tamer Önder and Elif Bilgiç and Petek Korkusuz and Ayşen Günel-Özcan and Duygu Uçkan-Çetinkaya and Fatima Aerts-Kaya},

url = {https://stemcellres.biomedcentral.com/articles/10.1186/s13287-021-02364-z},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {Stem cell research & therapy},

volume = {12},

number = {1},

pages = {1–13},

publisher = {BioMed Central},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{kelekcci2021generation,

title = {Generation of transgene-free iPSC lines from three patients with Friedreich’s ataxia (FRDA) carrying GAA triplet expansions in the first intron of FXN gene},

author = {Simge Kelekçi and Deniz Uğurlu-Çimen and Ata Berk Demir and Burcu Özçimen and Abdullah Burak Yıldız and Mehmet Batuhan Karakuş and Esra Börklü Yücel and Tamer T Önder},

url = {https://www.sciencedirect.com/science/article/pii/S1873506121002853},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {Stem Cell Research},

volume = {54},

pages = {102438},

publisher = {Elsevier},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{alici2020nlrp7,

title = {NLRP7 plays a functional role in regulating BMP4 signaling during differentiation of patient-derived trophoblasts},

author = {Aybuke Alici-Garipcan and Burcu Özçimen and Ilke Süder and Volkan Ülker and Tamer T Önder and Nesrin Özören},

url = {https://www.nature.com/articles/s41419-020-02884-1},

year  = {2020},

date = {2020-01-01},

urldate = {2020-01-01},

journal = {Cell Death & Disease},

volume = {11},

number = {8},

pages = {658},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{saracc2020systematic,

title = {Systematic characterization of chromatin modifying enzymes identifies KDM3B as a critical regulator in castration resistant prostate cancer},

author = {Hilal Saraç and Tunç Morova and Elisabete Pires and James McCullagh and Anıl Kaplan and Ahmet Cingöz and Tugba Bagci-Onder and Tamer Önder and Akane Kawamura and Nathan A Lack},

url = {https://www.nature.com/articles/s41388-019-1116-8},

year  = {2020},

date = {2020-01-01},

urldate = {2020-01-01},

journal = {Oncogene},

volume = {39},

number = {10},

pages = {2187–2201},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{bildik2020hcg,

title = {hCG improves luteal function and promotes progesterone output through the activation of JNK pathway in the luteal granulosa cells of the stimulated IVF cycles},

author = {Gamze Bildik and Nazli Akin and Yashar Esmaeilian and Francesko Hela and Kayhan Yakin and Tamer Onder and Bulent Urman and Ozgur Oktem},

url = {https://academic.oup.com/biolreprod/article-abstract/102/6/1270/5803445},

year  = {2020},

date = {2020-01-01},

urldate = {2020-01-01},

journal = {Biology of Reproduction},

volume = {102},

number = {6},

pages = {1270–1280},

publisher = {Oxford University Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{ebrahimi2019bromodomain,

title = {Bromodomain inhibition of the coactivators CBP/EP300 facilitate cellular reprogramming},

author = {Ayyub Ebrahimi and Kenan Sevinç and Gülben Gürhan Sevinç and Adam P Cribbs and Martin Philpott and Fırat Uyulur and Tunç Morova and James E Dunford and Sencer Göklemez and Şule Arı and others},

url = {https://www.nature.com/articles/s41589-019-0264-z},

year  = {2019},

date = {2019-01-01},

urldate = {2019-01-01},

journal = {Nature chemical biology},

volume = {15},

number = {5},

pages = {519–528},

publisher = {Nature Publishing Group US New York},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{taskin2019leptin,

title = {Leptin treatment of in vitro cultured embryos increases outgrowth rate of inner cell mass during embryonic stem cell derivation},

author = {Ali Cihan Taskin and Ahmet Kocabay and Ayyub Ebrahimi and Sercin Karahuseyinoglu and Gizem Nur Sahin and Burcu Ozcimen and Arzu Ruacan and Tamer T Onder},

url = {https://link.springer.com/article/10.1007/s11626-019-00367-y},

year  = {2019},

date = {2019-01-01},

urldate = {2019-01-01},

journal = {In Vitro Cellular & Developmental Biology-Animal},

volume = {55},

pages = {473–481},

publisher = {Springer US},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{kagiali2019systems,

title = {Systems-level Analysis Reveals Multiple Modulators of Epithelial-mesenchymal Transition and Identifies DNAJB4 and CD81 as Novel Metastasis Inducers in Breast Cancer*[S]},

author = {Zeynep Cansu Uretmen Kagiali and Erdem Sanal and Özge Karayel and Ayse Nur Polat and Özge Saatci and Pelin Gülizar Ersan and Kathrin Trappe and Bernhard Y Renard and Tamer T Önder and Nurcan Tuncbag and others},

url = {https://www.mcponline.org/article/S1535-9476(20)31777-1/abstract},

year  = {2019},

date = {2019-01-01},

urldate = {2019-01-01},

journal = {Molecular & Cellular Proteomics},

volume = {18},

number = {9},

pages = {1756–1771},

publisher = {Elsevier},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{akbari2019robust,

title = {Robust, long-term culture of endoderm-derived hepatic organoids for disease modeling},

author = {Soheil Akbari and Gülben Gürhan Sevinç and Nevin Ersoy and Onur Basak and Kubra Kaplan and Kenan Sevinc and Erkin Ozel and Berke Sengun and Eray Enustun and Burcu Ozcimen and others},

url = {https://www.sciencedirect.com/science/article/pii/S2213671119303017},

year  = {2019},

date = {2019-01-01},

urldate = {2019-01-01},

journal = {Stem Cell Reports},

volume = {13},

number = {4},

pages = {627–641},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{kurt2017kdm2b,

title = {KDM2B, an H3K36-specific demethylase, regulates apoptotic response of GBM cells to TRAIL},

author = {Ibrahim Cagri Kurt and Ilknur Sur and Ezgi Kaya and Ahmet Cingoz and Selena Kazancioglu and Zeynep Kahya and Omer Duhan Toparlak and Filiz Senbabaoglu and Zeynep Kaya and Ezgi Ozyerli and others},

url = {https://www.nature.com/articles/cddis2017288},

year  = {2017},

date = {2017-01-01},

urldate = {2017-01-01},

journal = {Cell Death & Disease},

volume = {8},

number = {6},

pages = {e2897–e2897},

publisher = {Nature Publishing Group},

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tppubtype = {article}

}

@article{takata2017induced,

title = {Induced-pluripotent-stem-cell-derived primitive macrophages provide a platform for modeling tissue-resident macrophage differentiation and function},

author = {Kazuyuki Takata and Tatsuya Kozaki and Christopher Zhe Wei Lee and Morgane Sonia Thion and Masayuki Otsuka and Shawn Lim and Kagistia Hana Utami and Kerem Fidan and Dong Shin Park and Benoit Malleret and others},

url = {https://www.sciencedirect.com/science/article/pii/S1074761317302777},

year  = {2017},

date = {2017-01-01},

urldate = {2017-01-01},

journal = {Immunity},

volume = {47},

number = {1},

pages = {183–198},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{breindel2017epigenetic,

title = {Epigenetic reprogramming of lineage-committed human mammary epithelial cells requires DNMT3A and loss of DOT1L},

author = {Jerrica L Breindel and Adam Skibinski and Maja Sedic and Ania Wronski-Campos and Wenhui Zhou and Patricia J Keller and Joslyn Mills and James Bradner and Tamer Onder and Charlotte Kuperwasser},

url = {https://www.sciencedirect.com/science/article/pii/S2213671117302825},

year  = {2017},

date = {2017-01-01},

urldate = {2017-01-01},

journal = {Stem cell reports},

volume = {9},

number = {3},

pages = {943–955},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{fidan2016transgene,

title = {Transgene-free disease-specific iPSC generation from fibroblasts and peripheral blood mononuclear cells},

author = {Kerem Fidan and Ayyub Ebrahimi and Özlem H Çağlayan and Burcu Özçimen and Tamer T Önder},

url = {https://link.springer.com/protocol/10.1007/7651_2015_278},

year  = {2016},

date = {2016-01-01},

urldate = {2016-01-01},

journal = {Patient-Specific Induced Pluripotent Stem Cell Models: Generation and Characterization},

pages = {215–231},

publisher = {Springer New York},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{zhang2016lin28,

title = {LIN28 regulates stem cell metabolism and conversion to primed pluripotency},

author = {Jin Zhang and Sutheera Ratanasirintrawoot and Sriram Chandrasekaran and Zhaoting Wu and Scott B Ficarro and Chunxiao Yu and Christian A Ross and Davide Cacchiarelli and Qing Xia and Marc Seligson and others},

url = {https://www.sciencedirect.com/science/article/pii/S1934590916300935},

year  = {2016},

date = {2016-01-01},

urldate = {2016-01-01},

journal = {Cell stem cell},

volume = {19},

number = {1},

pages = {66–80},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{ebrahimi2016histon,

title = {Histon 3 metillenmesinin yeniden programlanmadaki etkisinin incelenmesi},

author = {Ayyub Ebrahimi and Moleküler Biyoloji and ARI Şule and II Danışman and Tamer T ÖNDER},

url = {http://nek.istanbul.edu.tr:4444/ekos/TEZ/54169.pdf},

year  = {2016},

date = {2016-01-01},

urldate = {2016-01-01},

journal = {PhD, İstanbul Üniversitesi, İstanbul, Turkey (in Turkish)},

keywords = {},

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tppubtype = {article}

}

@article{fidan2015generation,

title = {Generation of integration-free induced pluripotent stem cells from a patient with Familial Mediterranean Fever (FMF)},

author = {Kerem Fidan and Gülnihal Kavaklıoğlu and Ayyub Ebrahimi and Can Özlü and Nur Zeynep Ay and Arzu Ruacan and Ahmet Gül and Tamer T Önder},

url = {https://www.sciencedirect.com/science/article/pii/S1873506115001531},

year  = {2015},

date = {2015-01-01},

urldate = {2015-01-01},

journal = {Stem Cell Research},

volume = {15},

number = {3},

pages = {694–696},

publisher = {Elsevier},

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tppubtype = {article}

}

@article{das2014distinct,

title = {Distinct and combinatorial functions of Jmjd2b/Kdm4b and Jmjd2c/Kdm4c in mouse embryonic stem cell identity},

author = {Partha Pratim Das and Zhen Shao and Semir Beyaz and Eftychia Apostolou and Luca Pinello and Alejandro De Los Angeles and Kassandra O’Brien and Jennifer Marino Atsma and Yuko Fujiwara and Minh Nguyen and others},

url = {https://www.sciencedirect.com/science/article/pii/S1097276513008617},

year  = {2014},

date = {2014-01-01},

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journal = {Molecular cell},

volume = {53},

number = {1},

pages = {32–48},

publisher = {Cell Press},

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@article{unternaehrer2014epithelial,

title = {The epithelial-mesenchymal transition factor SNAIL paradoxically enhances reprogramming},

author = {Juli J Unternaehrer and Rui Zhao and Kitai Kim and Marcella Cesana and John T Powers and Sutheera Ratanasirintrawoot and Tamer Onder and Tsukasa Shibue and Robert A Weinberg and George Q Daley},

url = {https://www.sciencedirect.com/science/article/pii/S2213671114002938},

year  = {2014},

date = {2014-01-01},

urldate = {2014-01-01},

journal = {Stem cell reports},

volume = {3},

number = {5},

pages = {691–698},

publisher = {Cell Press},

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tppubtype = {article}

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@article{shyh2013influence,

title = {Influence of threonine metabolism on S-adenosylmethionine and histone methylation},

author = {Ng Shyh-Chang and Jason W Locasale and Costas A Lyssiotis and Yuxiang Zheng and Ren Yi Teo and Sutheera Ratanasirintrawoot and Jin Zhang and Tamer Onder and Juli J Unternaehrer and Hao Zhu and others},

url = {https://www.science.org/doi/abs/10.1126/science.1226603},

year  = {2013},

date = {2013-01-01},

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journal = {Science},

volume = {339},

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pages = {222–226},

publisher = {American Association for the Advancement of Science},

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@article{zhu2013genome,

title = {Genome-wide chromatin state transitions associated with developmental and environmental cues},

author = {Jiang Zhu and Mazhar Adli and James Y Zou and Griet Verstappen and Michael Coyne and Xiaolan Zhang and Timothy Durham and Mohammad Miri and Vikram Deshpande and Philip L De Jager and others},

url = {https://www.sciencedirect.com/science/article/pii/S0092867412015553},

year  = {2013},

date = {2013-01-01},

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journal = {Cell},

volume = {152},

number = {3},

pages = {642–654},

publisher = {Cell Press},

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@article{onder2013mechanisms,

title = {Mechanisms of Somatic Cell Reprogramming},

author = {Tamer T Onder},

url = {https://link.springer.com/chapter/10.1007/978-1-4614-8066-2_14},

year  = {2013},

date = {2013-01-01},

urldate = {2013-01-01},

journal = {Stem Cells: Current Challenges and New Directions},

pages = {301–316},

publisher = {Springer New York},

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@article{onder2012chromatin,

title = {Chromatin-modifying enzymes as modulators of reprogramming},

author = {Tamer T Onder and Nergis Kara and Anne Cherry and Amit U Sinha and Nan Zhu and Kathrin M Bernt and Patrick Cahan and B Ogan Mancarci and Juli Unternaehrer and Piyush B Gupta and others},

url = {https://www.nature.com/articles/nature10953},

year  = {2012},

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journal = {Nature},

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publisher = {Nature Publishing Group UK London},

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@article{onder2012new,

title = {New lessons learned from disease modeling with induced pluripotent stem cells},

author = {Tamer T Onder and George Q Daley},

url = {https://www.sciencedirect.com/science/article/pii/S0959437X12000676},

year  = {2012},

date = {2012-01-01},

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journal = {Current opinion in genetics & development},

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publisher = {Elsevier Current Trends},

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@article{rai2011enhanced,

title = {Enhanced elimination of oxidized guanine nucleotides inhibits oncogenic RAS-induced DNA damage and premature senescence},

author = {Priyamvada Rai and Jennifer J Young and Dominick GA Burton and Maria G Giribaldi and Tamer T Onder and Robert A Weinberg},

url = {https://www.nature.com/articles/onc2010520},

year  = {2011},

date = {2011-01-01},

urldate = {2011-01-01},

journal = {Oncogene},

volume = {30},

number = {12},

pages = {1489–1496},

publisher = {Nature Publishing Group},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{kuo2011midbody,

title = {Midbody accumulation through evasion of autophagy contributes to cellular reprogramming and tumorigenicity},

author = {Tse-Chun Kuo and Chun-Ting Chen and Desiree Baron and Tamer T Onder and Sabine Loewer and Sandra Almeida and Cara M Weismann and Ping Xu and Jean-Marie Houghton and Fen-Biao Gao and others},

url = {https://www.nature.com/articles/ncb2332},

year  = {2011},

date = {2011-01-01},

urldate = {2011-01-01},

journal = {Nature cell biology},

volume = {13},

number = {10},

pages = {1214–1223},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{onder2011micrornas,

title = {microRNAs become macro players in somatic cell reprogramming},

author = {Tamer T Onder and George Q Daley},

url = {https://link.springer.com/article/10.1186/gm256},

year  = {2011},

date = {2011-01-01},

urldate = {2011-01-01},

journal = {Genome Medicine},

volume = {3},

pages = {1–3},

publisher = {BioMed Central},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{taube2010core,

title = {Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes},

author = {Joseph H Taube and Jason I Herschkowitz and Kakajan Komurov and Alicia Y Zhou and Supriya Gupta and Jing Yang and Kimberly Hartwell and Tamer T Onder and Piyush B Gupta and Kurt W Evans and others},

url = {https://www.pnas.org/doi/abs/10.1073/pnas.1004900107},

year  = {2010},

date = {2010-01-01},

urldate = {2010-01-01},

journal = {Proceedings of the National Academy of Sciences},

volume = {107},

number = {35},

pages = {15449–15454},

publisher = {National Academy of Sciences},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{loewer2010large,

title = {Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells},

author = {Sabine Loewer and Moran N Cabili and Mitchell Guttman and Yuin-Han Loh and Kelly Thomas and In Hyun Park and Manuel Garber and Matthew Curran and Tamer Onder and Suneet Agarwal and others},

url = {https://www.nature.com/articles/ng.710},

year  = {2010},

date = {2010-01-01},

urldate = {2010-01-01},

journal = {Nature genetics},

volume = {42},

number = {12},

pages = {1113–1117},

publisher = {Nature Publishing Group US New York},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{kojima2010autocrine,

title = {Autocrine TGF-B and stromal cell-derived factor-1 (SDF-1) signaling drives the evolution of tumor-promoting mammary stromal myofibroblasts},

author = {Yasushi Kojima and Ahmet Acar and Elinor Ng Eaton and Kieran T Mellody and Christina Scheel and Ittai Ben-Porath and Tamer T Onder and Zhigang C Wang and Andrea L Richardson and Robert A Weinberg and others},

url = {https://www.pnas.org/doi/abs/10.1073/pnas.1013805107},

year  = {2010},

date = {2010-01-01},

urldate = {2010-01-01},

journal = {Proceedings of the National Academy of Sciences},

volume = {107},

number = {46},

pages = {20009–20014},

publisher = {National Academy of Sciences},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{ma2010mir,

title = {miR-9, a MYC/MYCN-activated microRNA, regulates E-cadherin and cancer metastasis},

author = {Li Ma and Jennifer Young and Harsha Prabhala and Elizabeth Pan and Pieter Mestdagh and Daniel Muth and Julie Teruya-Feldstein and Ferenc Reinhardt and Tamer T Onder and Scott Valastyan and others},

url = {https://www.nature.com/articles/ncb2024},

year  = {2010},

date = {2010-01-01},

urldate = {2010-01-01},

journal = {Nature cell biology},

volume = {12},

number = {3},

pages = {247–256},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{gupta2009identification,

title = {Identification of selective inhibitors of cancer stem cells by high-throughput screening},

author = {Piyush B Gupta and Tamer T Onder and Guozhi Jiang and Kai Tao and Charlotte Kuperwasser and Robert A Weinberg and Eric S Lander},

url = {https://www.cell.com/fulltext/S0092-8674(09)00781-8},

year  = {2009},

date = {2009-01-01},

urldate = {2009-01-01},

journal = {Cell},

volume = {138},

number = {4},

pages = {645–659},

publisher = {Cell Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{rai2009continuous,

title = {Continuous elimination of oxidized nucleotides is necessary to prevent rapid onset of cellular senescence},

author = {Priyamvada Rai and Tamer T Onder and Jennifer J Young and Jose L McFaline and Bo Pang and Peter C Dedon and Robert A Weinberg},

url = {https://www.pnas.org/doi/abs/10.1073/pnas.0809834106},

year  = {2009},

date = {2009-01-01},

urldate = {2009-01-01},

journal = {Proceedings of the National Academy of Sciences},

volume = {106},

number = {1},

pages = {169–174},

publisher = {National Academy of Sciences},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{onder2008loss,

title = {Loss of E-cadherin promotes metastasis via multiple downstream transcriptional pathways},

author = {Tamer T Onder and Piyush B Gupta and Sendurai A Mani and Jing Yang and Eric S Lander and Robert A Weinberg},

url = {https://aacrjournals.org/cancerres/article-abstract/68/10/3645/540743},

year  = {2008},

date = {2008-01-01},

urldate = {2008-01-01},

journal = {Cancer research},

volume = {68},

number = {10},

pages = {3645–3654},

publisher = {American Association for Cancer Research},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{scheel2007adaptation,

title = {Adaptation versus selection: the origins of metastatic behavior},

author = {Christina Scheel and Tamer Onder and Antoine Karnoub and Robert A Weinberg},

url = {https://aacrjournals.org/cancerres/article-abstract/67/24/11476/533883},

year  = {2007},

date = {2007-01-01},

urldate = {2007-01-01},

journal = {Cancer research},

volume = {67},

number = {24},

pages = {11476–11480},

publisher = {American Association for Cancer Research},

keywords = {},

pubstate = {published},

tppubtype = {article}

}